Diagnostic Testing of Common Sexually Transmitted Infections
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This policy governs coverage criteria for diagnostic testing of selected STIs (Chlamydia trachomatis, Neisseria gonorrhoeae, Treponema pallidum, Trichomonas vaginalis, HSV, and HPV) for Blue Cross Blue Shield of Louisiana members and provides indications, limitations, and related policy links.
Added the term 'qualitative' to 'qualitative NAAT' in multiple coverage criteria (CC4, CC7, CC10, CC12, CC15, CC5, CC20.c.).
Expanded CC10 to specify coverage for qualitative NAAT for Trichomonas vaginalis across symptomatic individuals, follow-up testing >=3 months after diagnosis, annual screening for high-risk or HIV-positive asymptomatic individuals, and sexual assault follow-up.
Operationalizes which asymptomatic individuals qualify for annual T. vaginalis screening under CC10 by adding Note 8 with specific high-risk criteria.
Individual organism amplified probe testing for T. vaginalis is now solely addressed in this policy; multi-organism vaginitis panels that include T. vaginalis remain in policy M2057.
New CC23: nucleic acid testing to determine antimicrobial susceptibility in N. gonorrhoeae or macrolide resistance in M. genitalium does not meet coverage criteria.
Added CPT code 87800 and CPT codes 0483U, 0484U; added CPT 87626 in an off-cycle modification; removed multiple older CPT and G-codes as noted in coding updates.
Coverage Criteria for STI Diagnostic Testing
Syphilis antibody testing (covered scenarios)
Antibody testing for syphilis meets coverage criteria when ANY of the following are met:
Supports confirmatory testing on initial positive results and use of two-test serologic algorithm as described in policy.
Chlamydia NAAT (covered scenarios)
Chlamydia NAAT testing meets coverage criteria when ANY of the following are met:
NAAT of first-catch urine or appropriate swab (including extragenital sites when indicated) is the preferred method.
Chlamydia serology (not covered)
Chlamydia serology:
Serology cannot reliably distinguish current from past infection and is not recommended for routine diagnosis per policy.
Gonorrhea testing (covered scenarios)
Gonorrhea testing — NAAT and culture meet coverage criteria in the following situations:
NAAT is the preferred diagnostic method for genital and extragenital specimens; obtain site-directed specimens as indicated.
Culture is required for antimicrobial susceptibility and public-health surveillance when clinically indicated.
Trichomonas testing (covered and not covered)
Trichomonas testing — covered and not covered scenarios:
Policy clarifies 'qualitative NAAT' and defines high-risk for trichomoniasis in Note 8.
POCT enzyme immunoassays have limited sensitivity compared with NAAT and are not supported as meeting coverage criteria.
Mycoplasma genitalium testing
Mycoplasma genitalium testing — symptomatic versus asymptomatic:
Use FDA-cleared NAATs on recommended specimen types when available; consider resistance testing per provider guidance when indicated.
Asymptomatic screening is not supported by policy due to limited clinical utility.
Multitarget PCR (covered when individual indications met)
Multitarget PCR panels — when acceptable:
Panels that include additional organisms not covered by this policy or that duplicate non-covered screening may not meet criteria; multi-organism vaginitis panels that include T. vaginalis remain addressed in policy M2057 per revision notes.
Herpes simplex testing
Herpes simplex testing — preferred modalities and covered indications:
HSV DNA detection (NAAT/PCR) is preferred over culture due to superior sensitivity and specificity.
Non-type-specific assays lack clinical utility for diagnosis of genital disease.
Type-specific serology is reserved for targeted diagnostic or counseling scenarios; routine asymptomatic screening is not covered.
USPSTF and guideline guidance recommend against routine serologic screening in asymptomatic persons.
HPV testing (covered and not covered)
HPV testing — covered uses and limitations:
Use per oncology/cervical cancer screening indications and manufacturer/FDA-labeled uses (e.g., BD Onclarity assay where applicable).
Policy follows USPSTF guidance that HPV testing is not indicated for general asymptomatic STI screening outside cervical cancer screening algorithms.
PrEP baseline and ongoing STI screening
PrEP baseline and ongoing STI screening recommendations considered within coverage criteria context:
CDC-recommended baseline screening for PrEP includes STI screening for chlamydia, gonorrhea, and syphilis.
Include site-directed (urogenital, rectal, pharyngeal) NAATs as indicated by sexual practices.
Informational clinical testing guidance
Informational clinical testing guidance (supporting statements; informational only):
Informational guidance — not an independent coverage requirement.
Informational guidance supporting coverage criteria requiring confirmatory reflex testing.
Informational guidance only.
Informational guidance only.
Informational guidance only.
Informational guidance aligned to CDC recommendations.
Guideline-informed coverage considerations
Guideline- and evidence-informed considerations that support coverage decisions (informational):
Supports NAAT preference described in policy.
RCT evidence cited demonstrating clinical utility in ED setting.
Policy favors NAAT over antigen POCTs for primary screening.
Informational context for syphilis coverage stance.
Supports policy exclusion for asymptomatic HSV serology.
Covered testing indications
Covered testing indications summarized by risk, symptom, and population:
Includes gender-diverse individuals with a cervix.
Obtain extragenital specimens based on exposure history.
Document serologic algorithm and reflex quantitative NTT results per policy.
Routine asymptomatic HSV serology not supported.
Policy enumerates CC10 subcriteria for qualitative NAAT coverage.
Syphilis: TT-first algorithm
Syphilis TT-first (treponemal-first) algorithm and reflex guidance:
If automated EIA/CLIA tests with suboptimal specificity are used, perform an additional reflex confirmatory TPHA/TPPA as indicated.
Syphilis: NTT-first algorithm
Syphilis NTT-first (non-treponemal-first) algorithm:
When both TT and NTT are used as primary screening, ensure the NTT is quantitative if positive or discrepant.
Pathogen-specific testing
Pathogen-specific testing recommendations (preferred methods and specimen guidance):
NAAT is more sensitive/specific than older methods.
Maintain culture capacity when antimicrobial susceptibility testing is required.
Consider resistance testing when guiding therapy if available.
PCR replaces culture as gold standard.
Use direct detection methods in appropriate clinical contexts per guidance.
Screening intervals and populations
Screening intervals and target populations (summary):
Obtain extragenital testing as indicated by sexual practices.
Policy removed pregnancy-specific STI testing from this document and redirects to prenatal policy.
Guideline-based diagnostic recommendations
Guideline-based diagnostic recommendations (alignment with external guidance):
Consistent with BASHH, CDC, IUSTI guidance cited in policy.
Guideline-consistent reflex testing and repeat intervals for discordant results.
BASHH/IUSTI recommendations referenced.
CC10 - Qualitative NAAT for Trichomonas vaginalis
Qualitative NAAT for T. vaginalis MEETS COVERAGE CRITERIA in the following situations (CC10):
CC10
- CC10.a: For symptomatic individuals (see Note 7)
- CC10.b: Follow-up testing a minimum of three months after initial trichomoniasis diagnosis>=3 months
- CC10.c: Annual screening for asymptomatic individuals belonging to a high-risk group (see Note 8)annual
High-risk defined in Note 8
- CC10.d: Annual screening for asymptomatic individuals who have an HIV infectionannual
- CC10.e: As a part of follow-up in a victim of sexual assault
T. vaginalis qualitative NAAT coverage
Highlighted policy positions from revision history regarding T. vaginalis qualitative NAAT:
Revision history added 'qualitative' to NAAT references and created Note 8 defining high-risk for trichomoniasis.
M. genitalium NAAT
Coverage position for Mycoplasma genitalium NAAT (CC12/CC13):
Symptom-driven testing only; use FDA-cleared NAATs on recommended specimen types when available.
Asymptomatic screening not supported by current evidence per policy revision.
Multitarget PCR panel coverage
Multitarget PCR panel coverage rules (CC14 / panel expansion):
Panels that include non-covered targets or that substitute non-covered screening approaches are not supported by this policy; multi-organism vaginitis panels remain addressed in M2057 when applicable.
NAAT for antimicrobial resistance
NAAT to determine antimicrobial resistance — coverage stance:
Policy explicitly excludes NAAT-based antimicrobial resistance testing for these organisms due to limited validated clinical utility.
This policy favors molecular detection methods for many common STIs. Qualitative NAAT is the preferred modality for detection of C. trachomatis, N. gonorrhoeae, M. genitalium, T. vaginalis and for HSV lesion testing where indicated; these modalities MEET COVERAGE CRITERIA when the specific clinical indications in the policy are satisfied (e.g., symptomatic infection, members of defined high-risk groups, test-of-cure or specified screening intervals). The policy clarifies that references to NAAT in multiple criteria are intended to mean qualitative NAAT and that multitarget PCR panels are allowable only when targets are limited to the organisms listed in the policy and when individual coverage conditions are met.
NAAT/PCR testing for syphilis is explicitly limited in this policy. Serologic two-tier testing (treponemal plus nontreponemal) remains the standard approach and PCR/NAAT for genital syphilis DO NOT MEET COVERAGE CRITERIA as a routine diagnostic strategy. The document notes that NAAT has not been FDA-approved for genital syphilis and that no internationally approved PCR exists for Treponema pallidum, so molecular methods should only be used when strictly validated methods with appropriate quality controls are available.
Antigen-based point-of-care tests (POCTs) for Chlamydia trachomatis and Neisseria gonorrhoeae have substantially lower sensitivity than laboratory NAATs and are not recommended as primary screening tests. Systematic reviews cited in the policy report POCT sensitivities frequently well below NAAT performance (e.g., pooled POCT sensitivities in the range of ~12–63% depending on specimen) while near-patient NAATs demonstrate sensitivities >95–98%; consequently, antigen-detection POCTs lack sufficient sensitivity to meet coverage expectations for routine screening.
Routine serologic screening for genital herpes (HSV) in asymptomatic adolescents and adults — including pregnant persons — is discouraged in line with USPSTF guidance. The policy restates that HSV-2 serologic screening is associated with a high rate of false positives and potential psychosocial harms and therefore DOES NOT MEET COVERAGE CRITERIA for routine asymptomatic screening; type-specific serology retains a role in selected clinical scenarios (see policy criteria).
Traditional direct visualization methods for Treponema pallidum, such as darkfield examination, and certain direct fluorescent antibody tests are described as no longer recommended for routine diagnosis. Guidance notes these approaches are labor-intensive, subjective, and have been largely superseded by molecular methods for lesion testing where available; the policy marks direct fluorescent antibody testing as obsolete for routine use and highlights that immunohistochemistry or Warthin–Starry staining have limited routine value.
HPV testing is supported when used for diagnostic assessment of cancer or cancer therapy (e.g., NAAT for high-risk HPV or p16 immunohistochemistry) but is not covered as part of general STI screening panels for asymptomatic individuals. The policy reiterates public health guidance that oncogenic HPV testing should not be used for routine STI screening in men, adolescents, or women under age 30, nor for diagnosis of anogenital warts; cervical cancer screening uses specific HPV testing algorithms described in related guidance.
Multi-organism vaginitis panels that include Trichomonas vaginalis are not addressed for coverage under this policy when panel responsibilities lie within the related vaginitis policy; the document specifies that panels including T. vaginalis remain covered under policy AHS-M2057 and that individual-organism NAAT for T. vaginalis is addressed here. Providers should refer to policy M2057 for multi-organism vaginitis panel coverage and to this policy for standalone T. vaginalis testing indications.
STI screening related specifically to pregnancy has been removed from this policy and reassigned to the prenatal screening policy (AHS-G2035). The policy directs providers to manage prenatal STI testing under that separate prenatal screening policy rather than within this document.
The policy does not support indiscriminate asymptomatic screening for several infections. Specifically, routine screening of asymptomatic individuals for HSV-1/HSV-2, and screening asymptomatic individuals for Mycoplasma genitalium using NAAT, DOES NOT MEET COVERAGE CRITERIA. HPV testing as part of a general STI screen for asymptomatic individuals is likewise not supported. Where asymptomatic screening is allowed (for example, annual T. vaginalis screening in defined high‑risk groups or HIV-positive individuals), the policy lists those specific qualifying circumstances.
Some policy language enumerates non-coverage positions without repeating the phrase 'not medically necessary' verbatim. For example, the policy states that NAAT/PCR for genital syphilis and certain direct probe detection or quantitative NAAT modalities for listed organisms DO NOT MEET COVERAGE CRITERIA; these explicit non-coverage statements function equivalently to a not-medically-necessary decision even when that exact wording does not appear.
The USPSTF recommendation against routine HSV serology in asymptomatic individuals is reiterated in the policy and used to inform coverage stance. The policy references the USPSTF finding that serologic screening for genital herpes yields a high rate of false positives and potential psychosocial harms, and accordingly routine asymptomatic HSV serology is not supported.
HPV testing for oncogenic types is not recommended for use in STI screening for men, adolescents, or women under age 30. The policy aligns with CDC guidance that HPV NAAT is reserved for cervical cancer screening according to age-based algorithms and is not appropriate as part of general STI panels for asymptomatic individuals.
The policy describes direct fluorescent antibody (DFA) testing for T. pallidum as obsolete and no longer recommended for routine use; international guidance recommends molecular methods or darkfield where expertise exists, but emphasizes DFA and similar older staining techniques have limited routine diagnostic value.
Multiple guideline sources and the policy discourage routine HSV-2 testing in asymptomatic patients and limit type-specific serology to selected clinical scenarios. The policy states that type-specific HSV-2 serology is appropriate for recurrent or atypical symptoms with negative lesion PCR/culture, for clinical diagnosis when laboratory confirmation is lacking, or when a partner has genital herpes, but routine population screening is not covered.
CC24 in this policy explicitly lists direct probe detection and/or quantitative NAAT for a set of organisms (including C. trachomatis, N. gonorrhoeae, HSV‑1, HSV‑2, HPV, and T. pallidum) and states that these modalities DO NOT MEET COVERAGE CRITERIA. Tests falling under this criterion may therefore be subject to denial if submitted as covered services.
Nucleic acid testing intended to determine antimicrobial susceptibility (for example, NAAT-based resistance testing for N. gonorrhoeae or macrolide resistance mutations in M. genitalium) is specifically addressed in the policy and DOES NOT MEET COVERAGE CRITERIA. Culture-based susceptibility testing for gonorrhea remains the recommended approach when antimicrobial susceptibility determination is required (e.g., treatment failure).
The policy separates symptomatic and asymptomatic indications for Mycoplasma genitalium testing: qualitative NAAT for M. genitalium MEETS COVERAGE CRITERIA for symptomatic individuals, while screening asymptomatic individuals for M. genitalium using NAAT DOES NOT MEET COVERAGE CRITERIA.
Coding and Test Codes
| No codes listed |
| BD Onclarity HPV Assay | FDA-approved qualitative PCR NAAT for cervical swabs that identifies HPV types 16, 18, 45 and detects other high-risk HPV types. |
| BD Onclarity HPV Assay indications | Indicated for women 21+ with ASC-US to guide colposcopy referral; adjunctive screening with cytology in women 30+; first-line primary cervical cancer screening in women 25+ per manufacturer guidance. |
| No codes listed |
| Cepheid Xpert CT/NG | FDA-approved NAAT (real-time PCR) performed on GeneXpert instrument to detect Chlamydia trachomatis and Neisseria gonorrhoeae from urogenital and extragenital specimens; ~90-minute run time; specimen types include female/male urine, clinician- or patient-collected vaginal swabs, endocervical swabs, and pharyngeal and rectal swabs. |
| Abbott Alinity m STI Assay | In vitro RT-PCR multiplex assay detecting RNA of CT, TV, MG and DNA of NG from endocervical, vaginal, urine and other specimen types; first result under ~115 minutes per manufacturer. |
| FDA-cleared NAATs (no exact CPTs provided) | M. genitalium NAATs cleared for urine and urethral, penile meatal, endocervical, and vaginal swabs (per CDC guidance). |
| TPHA/TPPA/TP-EIA | Treponemal serologic assays (examples listed in text). |
| RPR/VDRL | Non-treponemal serologic assays; quantitative titers recommended for activity and treatment monitoring. |
| EIA/ELISA/CLIA | Automated treponemal screening assays used in TT-first algorithms. |
| NAAT | Nucleic acid amplification tests for Chlamydia trachomatis, Neisseria gonorrhoeae, Mycoplasma genitalium, and HSV lesion testing. |
| PCR | Polymerase chain reaction for direct detection of Treponema pallidum from lesions and for HSV DNA detection. |
| 86592 | Syphilis test, non-treponemal antibody; qualitative (eg, VDRL, RPR, ART). |
| 86593 | Syphilis test, non-treponemal antibody; quantitative. |
| 86631 | Antibody; Chlamydia. |
| 86632 | Antibody; Chlamydia, IGM. |
| 86694 | Antibody; herpes simplex, non-specific type test. |
| 86695 | Antibody; herpes simplex, type 1. |
| 86696 | Antibody; herpes simplex, type 2. |
| 86704 | Hepatitis B core antibody (HBcAb); total. |
| 86706 | Hepatitis B surface antibody (HBsAb). |
| 86780 | Antibody; Treponema pallidum. |
| 87181 | Susceptibility studies, antimicrobial agent; agar dilution method, per agent. |
| 87340 | Immunoassay; hepatitis B surface antigen (HBsAg), qualitative or semiquantitative. |
| 87490 | Infectious agent detection by nucleic acid (DNA or RNA); Chlamydia trachomatis, direct probe technique. |
| 87491 | Infectious agent detection by nucleic acid (DNA or RNA); Chlamydia trachomatis, amplified probe technique. |
| 87492 | Infectious agent detection by nucleic acid (DNA or RNA); Chlamydia trachomatis, quantification. |
| 87528 | Infectious agent detection by nucleic acid (DNA or RNA); Herpes simplex virus, direct probe technique. |
| 87529 | Infectious agent detection by nucleic acid (DNA or RNA); Herpes simplex virus, amplified probe technique. |
| 87530 | Infectious agent detection by nucleic acid (DNA or RNA); Herpes simplex virus, quantification. |
| 87563 | Infectious agent detection by nucleic acid (DNA or RNA); Mycoplasma genitalium, amplified probe technique. |
| 87590 | Infectious agent detection by nucleic acid (DNA or RNA); Neisseria gonorrhoeae, direct probe technique. |
| 82565 | Removed (referenced in revision history). |
| 82575 | Removed (referenced in revision history). |
| 84702 | Removed (referenced in revision history). |
| 84703 | Removed (referenced in revision history). |
| 86701 | Removed (referenced in revision history). |
| 86702 | Removed (referenced in revision history). |
| 86703 | Removed (referenced in revision history). |
| 86705 | Removed (referenced in revision history). |
| 86803 | Removed (referenced in revision history). |
| 86804 | Removed (referenced in revision history). |
| 87800 | Added (reference in revision history). |
| 0483U | Added (reference in revision history). |
| 0484U | Added (reference in revision history). |
| 87626 | Added (off-cycle coding modification). |
| 87660 | Added 03/10/2023 and later removed 10/01/2023 (referenced in revision history). |
| 87661 | Added 03/10/2023 and later removed (referenced in revision history). |
| 87808 | Added 03/10/2023 and later removed (referenced in revision history). |
| 0353U | Added 07/01/2024 then referenced in revision history. |
| 0354U | Added 04/01/2024 then referenced in revision history. |
| 87563 | Added 10/01/2023 (referenced in revision history). |
Provider Actions, Documentation, and Billing Guidance
No prior authorization specified — coverage per clinical indications
This policy excerpt does not specify any prior authorization requirement for STI assays; coverage is determined by whether the requested test meets the clinical indications described in the policy (e.g., CC criteria).
No prior authorization stated for proprietary assays in excerpt
Proprietary assays (examples: BD Onclarity, Cepheid Xpert CT/NG, Abbott Alinity m STI) are described with their specimen/indication details, but the policy text in this excerpt does not state any payer prior authorization requirement for these assays.
- Use manufacturer/FDA indications and specimen guidance when ordering proprietary platform tests.
- No PA language for these assays appears in the provided sections.
No explicit prior authorization requirements stated
The document reiterates that no explicit prior authorization requirements are specified in the policy sections presented; ensure coding and specimen type match the test performed when submitting claims.
- Confirm specimen type per platform (urine, clinician- or patient-collected vaginal swab, endocervical swab, pharyngeal/rectal swabs).
M. genitalium testing — use FDA-cleared NAATs; resistance testing when available
For Mycoplasma genitalium, the policy aligns with CDC recommendations: use FDA-cleared NAATs for indicated specimen types and perform resistance testing when available to guide therapy.
- NAAT specimen types include urine and urethral, penile meatal, endocervical, and vaginal swabs.
- If resistance testing is available, perform it to inform treatment for recurrent or persistent infections.
No prior authorization noted in guideline excerpts
Guideline and coverage text describe laboratory testing as standard-of-care using NAATs/serology where appropriate; no prior authorization requirement is specified in the guideline excerpts included here.
- NAATs are described as standard-of-care for chlamydia/gonorrhea; serologic algorithms described for syphilis.
Proprietary assay coding — verify billing per listed proprietary codes
The policy lists specific proprietary panel/assay CPT/U codes in the coding section; payer verification may be needed to ensure correct billing when using these proprietary tests.
Coding updates — verify PA requirements for added/removed CPT codes
Coding changes in the revision history (e.g., addition of CPT 87800 and other new/removed codes) mean providers should verify whether newly added or revised CPT codes require prior authorization under payer systems before submitting claims.
Verify prior authorization requirements on new/updated CPT codes
Operational recommendation: when ordering tests that use newly added or updated CPT codes referenced by this policy, providers should confirm payer-specific prior authorization rules and billing mappings to avoid claim issues.
No step therapy described
No step therapy requirements are described in this policy excerpt for diagnostic STI testing.
Syphilis diagnostic algorithm described — no step therapy
The policy describes a syphilis diagnostic algorithm (two-tiered treponemal and non-treponemal testing) and does not impose step therapy for testing.
- Algorithms detail reflex testing (TT and NTT) rather than step-therapy requirements.
No step therapy requirements for STI diagnostic tests
The policy explicitly states there are no step therapy requirements for STI diagnostic tests in the provided sections.
Obtain gonorrhea culture for suspected treatment failure and susceptibility testing
When gonorrhea treatment failure or suspected resistance is encountered, the policy requires culture capacity for N. gonorrhoeae to perform antimicrobial susceptibility testing.
- Obtain gonococcal culture for antimicrobial susceptibility when individuals do not respond to initial treatment.
- CDC recommends labs maintain or partner for culture capacity for surveillance and susceptibility testing.
No explicit provider action in excerpt
No content provided in this excerpt to support a provider action for this inventory placeholder.
No explicit provider action in excerpt
No content provided in this excerpt to support a provider action for this inventory placeholder.
No explicit provider action in excerpt
No content provided in this excerpt to support a provider action for this inventory placeholder.
Provider actions not specified in this document
This document does not specify certain provider actions referenced in other policies; where requirements are not specified here, follow the clinical indications and code verification steps outlined in the policy and applicable government rules.
Document clinical justification: risk status, symptoms, age, sexual assault, HIV status, and timing
Document the clinical justification for covered testing: risk category or high-risk status, symptoms, patient age (e.g., <18), sexual assault follow-up, HIV status, and timing relative to prior infection or treatment (e.g., TOC intervals).
- Indicate symptomatic vs asymptomatic and whether patient meets Note 8 high-risk criteria when ordering T. vaginalis NAAT or other screening.
- For TOC or retesting, document timing (e.g., >=3 months for trichomoniasis, 3-month TOC for chlamydia in some indications).
No explicit documentation/submission requirements for proprietary tests in excerpt; follow assay guidance
No explicit documentation or submission instructions are provided for proprietary tests in these chunks; use assay-specific specimen and indication guidance described by manufacturers when ordering and documenting.
- Follow platform-specific specimen guidance (e.g., Cervical swab for BD Onclarity; urine or vaginal/endocervical swabs for Abbott Alinity and Cepheid Xpert).
Document specimen type and collection method on orders and claims
Document the specimen type and collection method (e.g., clinician-collected endocervical swab, patient-collected vaginal swab in clinic, first-catch urine, pharyngeal or rectal swab) to support use of platform-specific assays.
- Cepheid Xpert and Abbott Alinity list acceptable specimen types—confirm and document the specimen on the order and claim.
- Specimen source impacts test sensitivity and appropriateness (e.g., rectal pharyngeal sampling when exposure indicated).
Neurosyphilis signs — obtain and document CSF cell/protein and reactive CSF‑VDRL
For patients with signs suggesting neurosyphilis, document CSF evaluation including cell count/protein and a reactive CSF‑VDRL; ocular/neurologic findings should prompt CSF testing prior to treatment as described by CDC guidance.
- Document neurologic, ocular, or otologic symptoms and CSF results (cell count/protein and CSF‑VDRL) when pursuing neurosyphilis evaluation.
Syphilis testing documentation — algorithm, reflex quantitative NTT, repeat testing
Document which serologic algorithm was used for syphilis testing (treponemal vs non-treponemal approach), include reflex quantitative NTT results and note any planned repeat testing to support coverage determinations.
- If TT used as primary screen and positive, document reflex quantitative NTT titer (target >=1:8 to 1:16) performed on same serum.
- If discordant (TT positive/NTT negative) without suspicion of early syphilis, document plan to repeat both tests in 1 month.
Syphilis confirmatory testing — document alternate treponemal test and quantitative RPR/VDRL
When initial syphilis screening is positive, document confirmatory testing with an alternate treponemal test and a quantitative RPR or VDRL; include specimen sources and results for screening and confirmatory tests.
- Record both treponemal and nontreponemal test results; include titers for quantitative NTT (RPR/VDRL).
- If primary NTT was used, ensure a reflex TT is performed and documented.
Document indication for T. vaginalis NAAT per CC10 subcriteria
For qualitative NAAT for T. vaginalis, document the indication in line with CC10 subcriteria: symptomatic status, timing of follow-up testing (>=3 months), membership in a high-risk group per Note 8, HIV-positive status if applicable, or sexual assault follow-up.
- CC10 enumerates coverage scenarios (symptomatic; >=3 months follow-up; annual screening for high-risk or HIV-positive asymptomatic individuals; sexual assault follow-up).
- Ensure documentation references the specific CC10 subcriterion that justifies testing.
Support T. vaginalis NAAT coverage with documentation of status, timing, and risk
For coverage of T. vaginalis qualitative NAAT, ensure documentation supports symptomatic status, timing of follow-up testing (>=3 months), high-risk membership per Note 8, HIV status if relevant, or sexual assault follow-up as applicable.
- Retesting after initial diagnosis should be documented as occurring at least 3 months post-diagnosis when used as follow-up.
- For annual screening under CC10.c/d, document high-risk status or HIV-positive status per policy Note 8.
Denial risk — tests explicitly designated as not meeting coverage criteria
Tests explicitly listed as not meeting coverage criteria (e.g., PCR/NAAT for syphilis; serology for chlamydia/LGV; rapid enzyme immunoassays for Trichomonas; nucleic acid testing for antimicrobial susceptibility) may trigger claim denial if submitted for coverage.
- CC23: NAAT to determine antimicrobial susceptibility for N. gonorrhoeae or macrolide resistance in M. genitalium does not meet coverage criteria.
- CC24: Direct probe detection and/or quantitative NAAT for listed organisms does not meet coverage criteria.
No additional explicit denial-trigger actions in excerpt
There are no additional denial-trigger provider actions explicitly stated in this excerpt.
Use NAAT for chlamydia and gonorrhea per guideline recommendations — non-NAAT methods risk denial
When screening or diagnosing chlamydia and gonorrhea, use NAATs per USPSTF/CDC recommendations; ordering lower-sensitivity non-NAAT methods where NAAT is recommended may risk noncoverage or denial.
- USPSTF and CDC recommend NAAT for chlamydia and gonorrhea screening in indicated populations.
- Avoid antigen-based POCTs as primary screening due to low sensitivity compared to NAAT.
Do not use a single serologic test alone for syphilis — perform/ document both TT and NTT
Do not rely on a single serologic test (treponemal OR nontreponemal) alone for syphilis diagnosis; submitting only one test without appropriate reflex/confirmatory testing may leave workup incomplete and risk denial or inadequate documentation.
- Policy and CDC guidance require both treponemal and nontreponemal tests interpreted together for diagnosis.
- If TT is primary and positive, a reflex quantitative NTT should be performed and documented.
Syphilis reflex testing expectation — perform reflex quantitative NTT (target >=1:8–1:16)
Failure to perform the recommended reflex quantitative non-treponemal test (e.g., RPR/VDRL titration to at least 1:8–1:16) when a treponemal test is positive may result in incomplete confirmatory workup and potential coverage issues.
- Reflex quantitative NTT titration should reach at least 1:8 to 1:16 dilution per guidance.
- Document reflex testing and titer results on the medical record and claim as applicable.
Government policy precedence — follow LCD/NCD/Medicaid rules when applicable
If there is any conflict between this policy and applicable government coverage (LCDs/NCDs or state Medicaid), the government policy governs determinations; failure to follow an applicable government policy could affect coverage decisions.
Denial risk — direct probe detection / quantitative NAAT under CC24 not covered
Tests that fall under CC24 (direct probe detection and/or quantitative NAAT for specified microorganisms) are designated as NOT MEETING COVERAGE CRITERIA and therefore may be denied if billed under the indicated scenarios.
- CC24 lists organisms including C. trachomatis, N. gonorrhoeae, HSV-1/2, HPV, and T. pallidum.
- Do not submit direct probe detection or quantitative NAAT for coverage when CC24 applies.
Do not submit NAATs intended to determine antimicrobial susceptibility — CC23 not covered
Claims for NAAT performed to determine antimicrobial susceptibility in N. gonorrhoeae or macrolide resistance in M. genitalium are designated as not meeting coverage criteria (CC23) and are subject to denial.
- CC23 explicitly states nucleic acid testing for antimicrobial susceptibility in N. gonorrhoeae or macrolide resistance in M. genitalium does not meet coverage criteria.
Background and Rationale
Background: Sexually transmitted infections encompass bacterial and viral pathogens that can cause substantial morbidity if untreated. Common infections such as chlamydia and gonorrhea contribute to reproductive tract complications (including pelvic inflammatory disease and infertility); syphilis can progress to severe cardiac and neurologic disease if not identified and treated; HSV is prevalent and often asymptomatic but can have significant clinical and psychosocial impacts; and oncogenic HPV types are linked to cancers. The policy focuses diagnostic coverage on a defined set of pathogens and aligns testing recommendations with public health guidance.
Definitions and Test Terminology
Policy Revision History and Changes
Added 'qualitative' clarifications to multiple NAAT references; moved individual T. vaginalis amplified probe testing solely into this policy; expanded CC10 to enumerate five situations for qualitative NAAT for T. vaginalis and added Note 8 defining high-risk for trichomoniasis; relocated pregnancy-related STI references to AHS-G2035; updated CC21/CC22 to focus PrEP STI screening.
Added CC23 to prohibit NAAT-based antimicrobial susceptibility testing for N. gonorrhoeae and macrolide resistance in M. genitalium; added CPT 87800 and CPTs 0483U/0484U; removed multiple legacy CPT/G codes; updated Notes 4 and 7 to align with CDC and added Note 8 (high-risk definition).
Off-cycle coding modification added CPT codes 0455U and 0463U and removed CPT 0353U; restored coverage for T. vaginalis outside of vaginitis policy and began moving Trichomonas coverage back into this policy resulting in CC17/18 (later reorganized).
Off-cycle coding modifications added CPT 87563 and 0402U and removed CPT 0354U; policy restored T. vaginalis coverage outside vaginitis and added CC17/18 including explicit noncoverage of rapid enzyme immunoassay for Trichomonas.
Removed pregnancy-specific STI testing from this policy and directed prenatal screening to AHS-G2035; added HPV testing language for cancer assessment and updated several coverage notes and CPT additions (e.g., 87660, 87661, 87808 in earlier history).
Revision summary: The policy's recent updates added and removed multiple CPT/proprietary codes and reallocated testing responsibilities between policies. Notably, the document operationalized 'qualitative NAAT' in several criteria, expanded CC10 for Trichomonas vaginalis coverage with a new Note 8 defining high-risk groups, added CC23 to prohibit NAAT-based antimicrobial resistance testing, and moved pregnancy-specific STI screening responsibilities to policy AHS‑G2035. Several CPT codes (e.g., 87800, 0483U, 0484U, 87626) were added in revisions while multiple older codes were removed; providers should verify current coding and authorizations when billing.
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