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    v1.0.30
    OpenPayerBilling CodesEndoscopy Procedures on the UreterCPT cpt-50961-percutaneous-endoscopic-ureteral-stone-removal
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    CPT 50961: Percutaneous Ureteroscopy via Existing Skin-Ureter Tract

    Medicare pays $416 on average nationally for this procedure.

    CPT code 50961 describes an endoscopic examination of the kidney, renal pelvis, and ureter performed through an existing percutaneous skin-to-ureter tract; the service is a percutaneous ureteroscopy typically used for removal of ureteral stones or foreign bodies and is commonly performed in an operating room or procedure suite under appropriate anesthesia as a specialized urologic endoscopic procedure.

    For related coverage guidance, see recent payer policy updates: Diabetic Supplies, Radiofrequency Ablation for Thyroid Nodules, Continuous Glucose Monitoring and Insulin Delivery for Managing Diabetes (for Idaho Only).

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    Table of contents

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    Clinical & Coding Specifications

    Clinical Context

    A 46-year-old male with a history of recurrent nephrolithiasis presents with acute onset right flank pain, hematuria, and nausea. Non-contrast CT confirms a 7 mm obstructing stone in the proximal right ureter with hydronephrosis and persistent symptoms despite medical management. The urology team schedules a ureteroscopy through an established percutaneous nephrostomy tract to evaluate and remove the ureteral stone and inspect the renal pelvis and ureter. In the operating room the patient undergoes anesthesia, cystoscopy to access the collecting system via the existing percutaneous tract, and endoscopic inspection of the renal pelvis and ureter. Stone extraction is performed with graspers and/or laser lithotripsy, fragments are retrieved, and a ureteral stent may be placed at the conclusion. Typical documentation includes indication, prior established skin-to-ureter access, findings, devices used, estimated blood loss, complications (if any), and post-op plan for stent management and follow-up imaging.

    Related CPT Codes

    CPT CodeDescriptionRelationship to This Procedure
    50680Percutaneous nephrostomy with dilation and/or conversion to a nephroureterostomy for urinary drainage or accessMay be performed prior to or in conjunction with percutaneous access establishment used for antegrade ureteroscopy.
    52352Cystoureteroscopy, with ureteroscopy and/or pyeloscopy; with removal of ureteral calculus (with or without lithotripsy)Commonly performed for ureteral stone management via a retrograde approach; may be an alternative or complement to antegrade approach.
    50590Lithotripsy, extracorporeal shock wave therapy (ESWL), unilateralAlternative noninvasive treatment for renal/ureteral stones; may be considered before endoscopic removal.
    52353Cystoureteroscopy, with ureteroscopy and/or pyeloscopy; with lithotripsy (laser, pneumatic)Performed when intracorporeal lithotripsy is used during endoscopic stone fragmentation; may be documented with antegrade or retrograde approaches.
    52648Ureteral stent placement, with or without cystoscopyOften performed after stone extraction to ensure ureteral drainage and facilitate passage of fragments.

    Related Modifiers

    12 rows

    ModifierDescriptionWhen to Use
    59Modifier 59 indicates a distinct procedural service when two procedures that are not normally billed together are clinically and procedurally separate. The CPT definition (as reiterated by CMS)…- Use modifier -59 to report a distinct procedural service when documentation supports that the procedure reported is not normally billed together with another service on the same day because of a…
    62Modifier 62 indicates that two surgeons function as co‑surgeons, each performing distinct parts of the same primary surgical procedure. It is appended to the primary procedure code (and any…- Use modifier -62 when two surgeons act as co‑surgeons (both primary surgeons) on a single definitive primary procedure, each performing distinct parts of the same surgical procedure (append -62 to…
    63Modifier‑63 is appended to surgical CPT codes (20000–69990) when a procedure is performed on a neonate or infant weighing ≤ 4 kg (about 8.8 lbs). The AMA/AAPC definition specifies this use and notes…- Use modifier -63 only for surgical procedures in the CPT 20000–69990 series performed on a neonate or infant who weighs ≤ 4 kg at the time of the procedure; it indicates increased complexity due to…
    76Modifier -76, Repeat Procedure or Service by Same Physician or Other Qualified Health Care Professional, is appended when the same provider performs an identical, medically necessary procedure or…- Use modifier -76 when the same physician or other qualified health care professional performs an identical procedure or service a second (or subsequent) time on the same date of service and the…
    78CPT modifier -78 indicates an unplanned, related return to the operating or procedure room by the same provider during the global postoperative period. It is appended when treatment for a…- Use modifier -78 when an unplanned, related complication during the original procedure’s global postoperative period requires the patient to return to a formal operating or procedure room and the…
    80CPT® Modifier 80 (Assistant Surgeon) is appended to a surgical CPT code when a physician (MD or DO) provides full, continuous assistance throughout the operative procedure. It is intended only for…- Use CPT Modifier -80 when a physician (MD or DO) serves as an assistant surgeon and provides full, continuous assistance throughout the entire operative procedure; append -80 to the surgical CPT…
    81Modifier -81 indicates a physician served as a minimal assistant surgeon for part—not all—of an operative procedure. Use when a physician’s assisting role is limited and does not represent full…- Use CPT modifier -81 when a physician acts as a minimum assistant surgeon who assists during only part (a limited portion) of an operative procedure; append -81 to the primary surgical CPT code to…
    52Modifier ‑52 (Reduced Services) indicates that a service or procedure was partially reduced or omitted at the provider’s discretion, allowing reporting of the basic procedure number with a qualifier…- Use modifier -52 when a physician or qualified health professional electively reduces or omits part of a procedure or service (for example, performing fewer required views or omitting a portion of…
    53Modifier 53 (Discontinued Procedure) signals that a surgical or diagnostic service was begun by the physician but terminated because of extenuating circumstances that threatened the patient’s…- Use modifier -53 when a physician/qualified healthcare professional has started a surgical or diagnostic procedure (e.g., anesthesia administered, incision or scope insertion) and then discontinues…
    26Modifier 26 (Professional Component) identifies and bills only the professional portion of a split service — the physician’s interpretation, report, and medical judgment — when the technical…- Use CPT Modifier -26 when you are billing only the professional component (PC) of a split‑bill eligible service—i.e., you performed the physician interpretation, medical judgment and prepared a…

    Showing 1–10 of 12

    Related Provider Taxonomies

    8 rows

    Taxonomy Code
    208U00000X
    208800000X
    208D00000X
    207L00000X
    171100000X
    207QA0505X
    3336S0011X
    364SR0400X

    Related Payer Policy Updates

    Specialty: Endocrinology1 / 3

    10 rows

    PolicyPayerEffective Date
    Diabetic SuppliesCigna2026-10-15
    Radiofrequency Ablation for Thyroid NodulesCigna2026-10-15
    Continuous Glucose Monitoring and Insulin Delivery for Managing Diabetes (for Idaho Only)UnitedHealthcare2026-10-01
    Tzield (teplizumab-mzwv) CoverageUnitedHealthcare2026-10-01
    Continuous Glucose Monitoring and Insulin Delivery for Managing Diabetes (for Indiana Only)UnitedHealthcare2026-10-01
    Medical Necessity Guidelines Insulin PumpsMass General Brigham Health Plan2026-10-01
    Medical Necessity Guidelines: Continuous Glucose MonitorsMass General Brigham Health Plan2026-10-01
    Continuous Glucose MonitoringAmbetter Nevada2026-10-01
    Salivary Hormone TestingOscar Health2026-10-01
    Bone Turnover Markers TestingOscar Health2026-10-01

    Related Codes

    CPT-50951-PERCUTANEOUS-URETEROSCOPY-URETERAL-STONE-REMOVAL

    CPT 50951: Percutaneous Nephroscopy/Ureteroscopy for Stone Evaluation and Removal

    CPT-50953-PERCUTANEOUS-URETEROSCOPIC-EXAMINATION-CATHETERIZATION

    CPT 50953: Endoscopic Exam via Cutaneous Ureteral Tract

    CPT-50955-ENDOSCOPIC-URETERAL-BIOPSY-VIA-ESTABLISHED-TRACT

    CPT 50955: Endoscopic Biopsy of Ureter via Established Tract

    CPT-50957-PERCUTANEOUS-ENDOSCOPIC-RENAL-URETEROSCOPIC-PROCEDURE-MALIGNANCY

    CPT 50957: Endoscopic Exam via Cutaneous Ureterostomy for Biopsy/Destruction

    CPT-50970-URETEROSCOPIC-EXAMINATION-AND-STONE-REMOVAL

    CPT 50970: Ureteroscopy with Ureterotomy for Ureteral Stone Removal

    CPT-50972-URETEROSCOPY-URETEROTOMY-FOR-STONE-REMOVAL

    CPT 50972: Ureteroscopy with Ureteral Endoscopy for Stone Removal

    CPT-50974-URETEROSCOPIC-KIDNEY-RENAL-PELVIS-URETER-BIOPSY-STONE-REMOVAL

    CPT 50974: Ureteroscopy with Biopsy and Ureteral Stone Removal

    CPT-50976-URETEROSCOPIC-EXAMINATION-BIOPSY-FULGURATION

    CPT 50976: Ureteroscopy with Biopsy and Tissue Destruction

    CPT-50980-URETEROSCOPY-WITH-URETEROTOMY-AND-STONE-REMOVAL

    CPT 50980: Ureteroscopy with Inspection and Stone Removal

    Frequently Asked Questions

    References

    1. 1.CPT® Codes and Descriptions. AAPC. Retrieved Aug 11, 2026.Maintains the CPT code set's official descriptions and guidelines, licensed from the American Medical Association, used as the definitional source for CPT codes on this page.
    2. 2.HCPCS Quarterly Update. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's quarterly release of HCPCS Level II codes and short/long descriptors, the source for HCPCS code definitions and update history.
    3. 3.ICD-10-CM Full Code List. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's complete ICD-10-CM diagnosis code list, used to cross-reference diagnosis codes associated with this procedure or service.
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