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    OpenPayerBilling CodesIncision Procedures on the Abdomen, Peritoneum, and OmentumCPT cpt-49040-subdiaphragmatic-abscess-incision-and-drainage
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    CPT 49040: Incision and Drainage of Subdiaphragmatic Abscess

    Medicare pays $967 on average nationally for this procedure.

    CPT code 49040 describes an open surgical procedure in which the provider makes an incision in the abdomen to drain a subdiaphragmatic abscess located beneath the diaphragm; the service type is surgical incision and drainage and the typical site of service is an inpatient or operating room/ambulatory surgery setting for management of intra-abdominal abscesses that require direct access and evacuation.

    For related coverage guidance, see recent payer policy updates: Ambulance and Medical Transport Services (Ground, Air and Water) Corporate Medical Policy, Emergency Air/Water Ambulance Services Medical Guideline, Non-Emergent Ambulance Services.

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    Table of contents

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    Clinical & Coding Specifications

    Clinical Context

    A typical patient is a 45–70-year-old adult presenting to the emergency department with fever, right upper quadrant or epigastric abdominal pain, leukocytosis, and evidence of a subdiaphragmatic fluid collection on CT scan consistent with an abscess located beneath the diaphragm. The clinical workflow begins with triage and sepsis screening, intravenous access, broad-spectrum antibiotics, analgesia, and CT-guided imaging. Interventional radiology may attempt percutaneous drainage when feasible. When percutaneous approaches are unsafe, have failed, or the abscess is loculated or communicating with intra-abdominal pathology, a general surgeon performs an open incision and drainage under general anesthesia. Intraoperative steps include abdominal incision, localization of the subdiaphragmatic abscess, controlled drainage, collection of cultures, irrigation, placement of drains if indicated, and abdominal closure. Postoperative care involves monitoring for ongoing sepsis, wound care, drain management, antibiotic adjustment based on cultures, and inpatient recovery or transfer to step-down care. Typical sites of service are the operating room or emergency surgical suite in an acute care hospital. Payors commonly involved include Aetna, Blue Cross Blue Shield, Cigna Health, UnitedHealthcare, BUCA, and Medicare.

    Related CPT Codes

    CPT CodeDescriptionRelationship to This Procedure
    49000Drainage of intra-abdominal abscess; superficial (e.g., subcutaneous, preperitoneal)May be used for more superficial intra-abdominal collections or as an alternative when abscess is not subdiaphragmatic.
    49010Drainage of intra-abdominal abscess; intraperitoneal, single or multipleRelated when the abscess is intraperitoneal rather than subdiaphragmatic; may be performed in same clinical spectrum.
    49080Incision and drainage of perirectal abscess; complicated or multipleRelated as another abdominal/pelvic abscess drainage CPT for nearby anatomic regions but different site.
    10160Puncture aspiration of abscess (eg, carbuncle, suppurative hidradenitis, skin or subcutaneous)Used for smaller, superficial abscesses or bedside drainage that could precede or obviate operative drainage.
    49406Placement of intraperitoneal catheter for drainage (eg, paracentesis)May be used when postoperative or adjunctive peritoneal drainage catheters are required.
    76942Ultrasonic guidance for needle placement (eg, abscess drainage)Often used when imaging guidance is required for percutaneous approaches or intraoperative localization.

    Related Modifiers

    12 rows

    ModifierDescriptionWhen to Use
    22Modifier –22 (Increased Procedural Services) is used when a reported procedure is substantially more extensive than normally required. The CPT Manual and CMS state it may be appended only when the…- When to use: Append modifier -22 to a procedural CPT code when the service performed is substantially more extensive than the usual service described by that code — i.e., the procedure required…
    23Modifier -23 (Unusual Anesthesia) is used on anesthesia service CPT codes when a procedure that normally requires no anesthesia or only local anesthesia must be performed under general anesthesia…- Use modifier -23 only on anesthesia CPT codes (00100–01999) when a procedure that normally requires no anesthesia or only local anesthesia must be performed under general anesthesia because of…
    26Modifier 26 (Professional Component) identifies and bills only the professional portion of a split service — the physician’s interpretation, report, and medical judgment — when the technical…- Use CPT Modifier -26 when you are billing only the professional component (PC) of a split‑bill eligible service—i.e., you performed the physician interpretation, medical judgment and prepared a…
    50Modifier –50 (Bilateral Procedure) is appended to a CPT code when an identical procedure is performed on paired anatomical structures during the same operative session. The AMA states to add…- Use modifier -50 when the same CPT surgical, diagnostic, or radiology procedure is performed on paired anatomical structures (both sides of the body) during the same operative/session by the same…
    51Modifier –51 (Multiple Procedures) is used when the same provider performs multiple procedures in the same session to identify secondary, non‑exempt procedures and indicate payment reduction logic…- Use modifier -51 when the same provider performs multiple distinct procedures during the same patient encounter: report the highest‑valued procedure first (no modifier) and append -51 to…
    52Modifier ‑52 (Reduced Services) indicates that a service or procedure was partially reduced or omitted at the provider’s discretion, allowing reporting of the basic procedure number with a qualifier…- Use modifier -52 when a physician or qualified health professional electively reduces or omits part of a procedure or service (for example, performing fewer required views or omitting a portion of…
    53Modifier 53 (Discontinued Procedure) signals that a surgical or diagnostic service was begun by the physician but terminated because of extenuating circumstances that threatened the patient’s…- Use modifier -53 when a physician/qualified healthcare professional has started a surgical or diagnostic procedure (e.g., anesthesia administered, incision or scope insertion) and then discontinues…
    62Modifier 62 indicates that two surgeons function as co‑surgeons, each performing distinct parts of the same primary surgical procedure. It is appended to the primary procedure code (and any…- Use modifier -62 when two surgeons act as co‑surgeons (both primary surgeons) on a single definitive primary procedure, each performing distinct parts of the same surgical procedure (append -62 to…
    78CPT modifier -78 indicates an unplanned, related return to the operating or procedure room by the same provider during the global postoperative period. It is appended when treatment for a…- Use modifier -78 when an unplanned, related complication during the original procedure’s global postoperative period requires the patient to return to a formal operating or procedure room and the…
    80CPT® Modifier 80 (Assistant Surgeon) is appended to a surgical CPT code when a physician (MD or DO) provides full, continuous assistance throughout the operative procedure. It is intended only for…- Use CPT Modifier -80 when a physician (MD or DO) serves as an assistant surgeon and provides full, continuous assistance throughout the entire operative procedure; append -80 to the surgical CPT…

    Showing 1–10 of 12

    Related Provider Taxonomies

    8 rows

    Taxonomy Code
    207Q00000X
    208000000X
    208800000X
    207P00000X
    282N00000X
    207QP0002X
    2085N0904X
    207RA0401X

    Related ICD-10-CM Codes

    25 rows

    ICD-10-CM CodeDescription
    A41.9Sepsis, unspecified organism
    A49.9Bacterial infection, unspecified
    J86.0Pyothorax with fistula
    K35.80Unspecified acute appendicitis
    K52.9Noninfective gastroenteritis and colitis, unspecified
    K57.10Diverticulosis of small intestine without perforation or abscess without bleeding
    K57.20Diverticulitis of large intestine with perforation and abscess without bleeding
    K57.30Diverticulosis of large intestine without perforation or abscess without bleeding
    K57.32Diverticulitis of large intestine without perforation or abscess without bleeding
    K59.1Functional diarrhea

    Showing 1–10 of 25

    Related Payer Policy Updates

    Specialty: Emergency & Medical Transportation1 / 3

    10 rows

    PolicyPayerEffective Date
    Ambulance and Medical Transport Services (Ground, Air and Water) Corporate Medical Policybcbsvermont2026-10-01
    Emergency Air/Water Ambulance Services Medical GuidelineWPS Health Insurance2026-10-01
    Non-Emergent Ambulance ServicesConnectiCare2026-09-11
    Fixed Wing Air Ambulance TransportCigna2026-08-15
    Air AmbulanceAmbetter Georgia2026-08-01
    Ambulance Services (for Tennessee Only)UnitedHealthcare2026-08-01
    Ambulance Services (for New Mexico Only)UnitedHealthcare2026-08-01
    Air AmbulanceCentene2026-08-01
    Clinical Policy: Air AmbulanceAmbetter Nevada2026-08-01
    Clinical Policy: Air AmbulanceArizona Complete Health2026-08-01

    Related Codes

    CPT-49000-INTRA-ABDOMINAL-EXPLORATION-WITH-BIOPSY

    CPT 49000: Exploratory Laparotomy with Diagnostic Biopsy

    CPT-49002-EXPLORATORY-REOPENING-OF-ABDOMINAL-INCISION

    CPT 49002: Exploration of Abdominal Incision for Complications

    CPT-49010-RETROPERITONEAL-EXPLORATION-WITH-BIOPSY

    CPT 49010: Retroperitoneal Exploration with Biopsy

    CPT-49013-PELVIC-PREPERITONEAL-PACKING-FOR-HEMORRHAGE-CONTROL

    CPT 49013: Pelvic Cavity Packing for Hemorrhage Control

    CPT-49014-PELVIC-CAVITY-REOPENING-AND-REMOVAL-OF-PACKING

    CPT 49014: Reopen Pelvic Cavity, Remove Preperitoneal Packing

    CPT-49020-OPEN-INCISION-DRAINAGE-INTRA-ABDOMINAL-ABSCESS

    CPT 49020: Incision and Drainage of Peritoneal Abscess, Open

    CPT-49060-RETROPERITONEAL-ABSCESS-DRAINAGE-OPEN

    CPT 49060: Retroperitoneal Abscess Incision and Drainage

    CPT-49062-EXTRAPERITONEAL-LYMPHATIC-FLUID-DRAINAGE

    CPT 49062: Drainage of Extraperitoneal Lymphatic Collection

    CPT-49082-ABDOMINAL-PARACENTESIS-WITHOUT-IMAGING

    CPT 49082: Paracentesis, abdominal, without imaging

    CPT-49083-IMAGE-GUIDED-ABDOMINAL-PARACENTESIS

    CPT 49083: Imaging-Guided Abdominal Paracentesis

    Showing 1–10 of 11

    Frequently Asked Questions

    References

    1. 1.CPT® Codes and Descriptions. AAPC. Retrieved Aug 11, 2026.Maintains the CPT code set's official descriptions and guidelines, licensed from the American Medical Association, used as the definitional source for CPT codes on this page.
    2. 2.HCPCS Quarterly Update. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's quarterly release of HCPCS Level II codes and short/long descriptors, the source for HCPCS code definitions and update history.
    3. 3.ICD-10-CM Full Code List. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's complete ICD-10-CM diagnosis code list, used to cross-reference diagnosis codes associated with this procedure or service.
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