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    v1.0.30
    OpenPayerBilling CodesExcision Procedures on the Intestines (Except Rectum)CPT cpt-44127-small-bowel-resection-anastomosis-intestinal-atresia
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    CPT 44127: Resection and Anastomosis for Congenital Small-Bowel Atresia

    Medicare pays $2637 on average nationally for this procedure.

    CPT code 44127 describes a surgical procedure in which an abdominal incision is made to excise a single narrowed segment of small intestine present from congenital atresia, followed by resection and hand-sewn or stapled anastomosis between the remaining intestinal loops with tapering or intussusception of one end to match diameters; service type: open abdominal intestinal resection with anastomosis for congenital small-bowel atresia; typical site of service: inpatient operating room for pediatric or neonatal surgical care.

    For related coverage guidance, see recent payer policy updates: Percutaneous Electrical Nerve Field Stimulation for Functional Abdominal Pain Disorders, Esophagogastroduodenoscopy (EGD) Coverage Policy, Radiofrequency Therapy for Fecal Incontinence.

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    Clinical & Coding Specifications

    Clinical Context

    A typical patient is a neonate or infant diagnosed with jejunal or ileal atresia presenting with abdominal distention, bilious emesis, and failure to pass meconium. Prenatal ultrasound or postnatal radiographs raise suspicion; contrast study and abdominal ultrasound support diagnosis. The surgical team (pediatric surgeon, anesthesiologist, neonatal intensivist) evaluates the infant, confirms stabilization, and schedules operative repair.

    Preoperative workflow includes fluid resuscitation, electrolyte correction, nasogastric decompression, and broad-spectrum antibiotics as indicated. The procedure involves a transverse or midline laparotomy, identification of the atretic segment, resection of the single narrowed ileal or jejunal segment, and creation of an end-to-end or end-to-side anastomosis with tapering (enteroplasty) or spatulation to match luminal diameters. Intraoperative considerations include assessment of bowel viability, ensuring adequate perfusion of anastomotic ends, and minimizing tension.

    Postoperative workflow includes admission to the neonatal intensive care unit, pain control, monitoring for anastomotic leak or obstruction, gradual advancement of enteral feeds, and follow-up for growth and bowel function. Typical length of stay depends on gestational age and comorbidities but often ranges from several days to weeks.

    Typical site of service: inpatient hospital operating room with postoperative admission to neonatal/pediatric intensive care.

    Service type: open surgical repair of small intestinal atresia with resection and anastomosis (enterostomy avoided).

    Related CPT Codes

    CPT CodeDescriptionRelationship to This Procedure
    44200Enterotomy, small intestine, single; with removal of foreign body, polyp, or lesion, simple closureCan be performed if a limited enterotomy is needed for decompression or lesion removal adjacent to the atresia.
    44120Enterolysis (separating adhesions), single or multiple, small intestinePerformed if dense adhesions are encountered during laparotomy in older infants or reoperations.
    43840Resection, small intestine with anastomosis, single resection and anastomosis (separate code for older children/adults)Related resection/anastomosis codes for different anatomic levels; used when mapping to age/approach variants.
    49560Repair of incarcerated or strangulated hernia; newborn/infant (open)May be performed concurrently if a congenital hernia is identified and requires repair during the same anesthetic.
    76937Ultrasound guidance for aspiration/placement of catheterUsed preoperatively for guided paracentesis if required for diagnosis or decompression prior to definitive repair.

    Related Modifiers

    11 rows

    ModifierDescriptionWhen to Use
    22Modifier –22 (Increased Procedural Services) is used when a reported procedure is substantially more extensive than normally required. The CPT Manual and CMS state it may be appended only when the…- When to use: Append modifier -22 to a procedural CPT code when the service performed is substantially more extensive than the usual service described by that code — i.e., the procedure required…
    23Modifier -23 (Unusual Anesthesia) is used on anesthesia service CPT codes when a procedure that normally requires no anesthesia or only local anesthesia must be performed under general anesthesia…- Use modifier -23 only on anesthesia CPT codes (00100–01999) when a procedure that normally requires no anesthesia or only local anesthesia must be performed under general anesthesia because of…
    26Modifier 26 (Professional Component) identifies and bills only the professional portion of a split service — the physician’s interpretation, report, and medical judgment — when the technical…- Use CPT Modifier -26 when you are billing only the professional component (PC) of a split‑bill eligible service—i.e., you performed the physician interpretation, medical judgment and prepared a…
    50Modifier –50 (Bilateral Procedure) is appended to a CPT code when an identical procedure is performed on paired anatomical structures during the same operative session. The AMA states to add…- Use modifier -50 when the same CPT surgical, diagnostic, or radiology procedure is performed on paired anatomical structures (both sides of the body) during the same operative/session by the same…
    52Modifier ‑52 (Reduced Services) indicates that a service or procedure was partially reduced or omitted at the provider’s discretion, allowing reporting of the basic procedure number with a qualifier…- Use modifier -52 when a physician or qualified health professional electively reduces or omits part of a procedure or service (for example, performing fewer required views or omitting a portion of…
    53Modifier 53 (Discontinued Procedure) signals that a surgical or diagnostic service was begun by the physician but terminated because of extenuating circumstances that threatened the patient’s…- Use modifier -53 when a physician/qualified healthcare professional has started a surgical or diagnostic procedure (e.g., anesthesia administered, incision or scope insertion) and then discontinues…
    62Modifier 62 indicates that two surgeons function as co‑surgeons, each performing distinct parts of the same primary surgical procedure. It is appended to the primary procedure code (and any…- Use modifier -62 when two surgeons act as co‑surgeons (both primary surgeons) on a single definitive primary procedure, each performing distinct parts of the same surgical procedure (append -62 to…
    63Modifier‑63 is appended to surgical CPT codes (20000–69990) when a procedure is performed on a neonate or infant weighing ≤ 4 kg (about 8.8 lbs). The AMA/AAPC definition specifies this use and notes…- Use modifier -63 only for surgical procedures in the CPT 20000–69990 series performed on a neonate or infant who weighs ≤ 4 kg at the time of the procedure; it indicates increased complexity due to…
    66Modifier 66 (Surgical Team) is used when three or more surgeons act as primary surgeons on a single, highly complex procedure. The AMA defines it for use when a surgical team — often composed of…- Use modifier 66 when three or more surgeons act as primary surgeons working collaboratively as a surgical team on a single, highly complex or difficult procedure (for example organ…
    78CPT modifier -78 indicates an unplanned, related return to the operating or procedure room by the same provider during the global postoperative period. It is appended when treatment for a…- Use modifier -78 when an unplanned, related complication during the original procedure’s global postoperative period requires the patient to return to a formal operating or procedure room and the…

    Showing 1–10 of 11

    Related Provider Taxonomies

    8 rows

    Taxonomy Code
    207P00000X
    2080P0207X
    363L00000X
    207RP1001X
    207L00000X
    2278S1500X
    2279P1004X
    225XF0002X

    Related ICD-10-CM Codes

    20 rows

    ICD-10-CM CodeDescription
    E86.0Dehydration
    K55.9Vascular disorder of intestine, unspecified
    K56.0Paralytic ileus
    K56.2Volvulus
    K56.7Ileus, unspecified
    K90.89Other intestinal malabsorption
    P76.0Meconium plug syndrome
    P76.1Transitory ileus of newborn
    P78.0Perinatal intestinal perforation
    P78.1Other neonatal peritonitis

    Showing 1–10 of 20

    Related Payer Policy Updates

    Specialty: Gastroenterology1 / 4

    10 rows

    PolicyPayerEffective Date
    Percutaneous Electrical Nerve Field Stimulation for Functional Abdominal Pain Disordersbcbsvermont2026-12-01
    Esophagogastroduodenoscopy (EGD) Coverage Policyevicore2026-11-05
    Radiofrequency Therapy for Fecal IncontinenceCigna2026-10-15
    Magnetic Sphincter Augmentation for the Treatment of Gastroesophageal Reflux Disease (GERD)univerahealthcare2026-10-15
    High-Resolution Anoscopy (HRA)Premera Bluecross2026-10-01
    Gastroesophageal and Gastrointestinal (GI) Services and ProceduresColorado Rocky Mountain Health Plans2026-10-01
    Fecal Analysis in the Diagnosis of Intestinal Dysbiosis and Fecal Microbiota Transplant TestingOscar Health2026-10-01
    Serum Testing for Hepatic Fibrosis in the Evaluation and Monitoring of Chronic Liver DiseaseOscar Health2026-10-01
    Pancreatic Enzyme Testing for Acute PancreatitisOscar Health2026-10-01
    Helicobacter pylori TestingOscar Health2026-10-01

    Related Codes

    CPT-44100-SMALL-INTESTINE-CAPSULE-BIOPSY

    CPT 44100: Small Intestine Biopsy via Oral Capsule

    CPT-44110-OPEN-EXCISION-INTESTINAL-LESION-SINGLE-INCISION

    CPT 44110: Excision of Lesion(s) From Small or Large Intestine

    CPT-44111-INTESTINAL-LESION-EXCISION-MULTIPLE-INCISIONS

    CPT 44111: Excision of Intestinal Lesions via Multiple Incisions

    CPT-44120-SMALL-INTESTINE-RESECTION-PRIMARY-ANASTOMOSIS

    CPT 44120: Small Bowel Resection with Primary Anastomosis

    CPT-44121-ADDITIONAL-SMALL-INTESTINE-RESECTION-ANASTOMOSIS

    CPT 44121: Additional Small Intestine Resection and Anastomosis

    CPT-44125-SMALL-INTESTINE-RESECTION-WITH-STOMA-CREATION

    CPT 44125: Small Bowel Resection with Enterostomy

    CPT-44126-SMALL-BOWEL-RESECTION-CONGENITAL-ATRESIA-END-TO-END-ANASTOMOSIS

    CPT 44126: Small Bowel Resection for Intestinal Atresia with Anastomosis

    CPT-44128-SMALL-BOWEL-RESECTION-ANASTOMOSIS-CONGENITAL-ATRESIA

    CPT 44128: Resection of Small Intestine for Congenital Atresia

    CPT-44130-INTESTINAL-ANASTOMOSIS-BOWEL-RESECTION-ANASTOMOSIS

    CPT 44130: Intestinal Anastomosis, With or Without Stoma

    CPT-44132-DONOR-SMALL-BOWEL-RESECTION-PRESERVATION-FOR-TRANSPLANT

    CPT 44132: Open Small Intestine Resection for Transplant Preservation

    Showing 1–10 of 29

    Frequently Asked Questions

    References

    1. 1.CPT® Codes and Descriptions. AAPC. Retrieved Aug 11, 2026.Maintains the CPT code set's official descriptions and guidelines, licensed from the American Medical Association, used as the definitional source for CPT codes on this page.
    2. 2.HCPCS Quarterly Update. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's quarterly release of HCPCS Level II codes and short/long descriptors, the source for HCPCS code definitions and update history.
    3. 3.ICD-10-CM Full Code List. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's complete ICD-10-CM diagnosis code list, used to cross-reference diagnosis codes associated with this procedure or service.
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