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    OpenPayerBilling CodesIncision Procedures on the AnusCPT cpt-46040-incision-drainage-anorectal-ischiorectal-abscess
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    CPT 46040: Incision and Drainage of Anal/Ischiorectal Abscess

    Medicare pays $649 on average nationally for this procedure.

    CPT code 46040 describes surgical drainage of anorectal and ischiorectal abscesses through perianal/incisional access; the service involves incision and drainage of abscess pockets around the rectum and in the ischiorectal fossa. Service type: surgical incision and drainage procedure. Typical site of service: outpatient surgery or operating room/ambulatory surgical center with access to the perianal region or rectal area.

    For related coverage guidance, see recent payer policy updates: Surgical Procedures, Outpatient Surgical Procedures - Site of Service, Site of Service Ambulatory Service Center (ASC) Select — Surgical or Diagnostic Procedures in Adults.

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    Table of contents

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    Clinical & Coding Specifications

    Clinical Context

    A typical patient is an adult presenting to the emergency department or outpatient surgery center with acute perianal pain, swelling, fever, or drainage. Examination reveals a tender fluctuant mass adjacent to the anal canal or deep in the ischiorectal fossa consistent with an anorectal abscess. Initial evaluation includes history, vital signs, focused anorectal exam, and point-of-care imaging (ultrasound or CT) when deep extension is suspected. The clinical workflow proceeds with consent, intravenous or local anesthesia (or monitored anesthesia care for deeper or complex abscesses), positioning in lithotomy or prone jackknife, perianal antisepsis, and placement of an appropriate incision in the anoderm or perianal skin to establish drainage of purulent material. Culture may be obtained. Packing or placement of a drain may follow; wound care instructions and short-course antibiotics are provided when indicated. Follow-up is arranged with colorectal surgery, general surgery, or primary care for wound checks and to evaluate for fistula formation. Typical site of service is the outpatient minor procedure room, ambulatory surgery center, emergency department, or inpatient operating room for complicated or immunocompromised patients. The service type is surgical, specifically a perianal/anorectal incision and drainage procedure coded as 46040.

    Related CPT Codes

    CPT CodeDescriptionRelationship to This Procedure
    10160Puncture aspiration of abscess, complicated or multipleMay be used when needle aspiration (instead of incision) is performed for perianal abscesses or for additional abscess pockets.
    12032Repair, intermediate, wounds of scalp, axillae, trunk and/or extremities; 2.5 cm to 7.5 cmUsed if concurrent intermediate repair of perianal wounds is required after drainage (site-appropriate wound closure).
    51701Complex urethral catheterization, initial; e.g., difficult or in presence of obstructionMay be performed concurrently in patients requiring bladder drainage or monitoring in perioperative care (rare).
    99024Postoperative follow-up visit, global period, related to the procedureUsed for routine postoperative visits during the global period for 46040.
    99284Emergency department visit, high severityCommonly billed for ED evaluation that leads to performance of 46040 during the same encounter.
    99213Office or other outpatient visit for an established patient, low to moderate complexityUsed for pre- or post-procedure evaluation and wound checks in outpatient settings.

    Related Modifiers

    14 rows

    ModifierDescriptionWhen to Use
    22Modifier –22 (Increased Procedural Services) is used when a reported procedure is substantially more extensive than normally required. The CPT Manual and CMS state it may be appended only when the…- When to use: Append modifier -22 to a procedural CPT code when the service performed is substantially more extensive than the usual service described by that code — i.e., the procedure required…
    23Modifier -23 (Unusual Anesthesia) is used on anesthesia service CPT codes when a procedure that normally requires no anesthesia or only local anesthesia must be performed under general anesthesia…- Use modifier -23 only on anesthesia CPT codes (00100–01999) when a procedure that normally requires no anesthesia or only local anesthesia must be performed under general anesthesia because of…
    52Modifier ‑52 (Reduced Services) indicates that a service or procedure was partially reduced or omitted at the provider’s discretion, allowing reporting of the basic procedure number with a qualifier…- Use modifier -52 when a physician or qualified health professional electively reduces or omits part of a procedure or service (for example, performing fewer required views or omitting a portion of…
    53Modifier 53 (Discontinued Procedure) signals that a surgical or diagnostic service was begun by the physician but terminated because of extenuating circumstances that threatened the patient’s…- Use modifier -53 when a physician/qualified healthcare professional has started a surgical or diagnostic procedure (e.g., anesthesia administered, incision or scope insertion) and then discontinues…
    54Modifier ‑54 (“Surgical care only”) is appended to a CPT surgical procedure when the reporting surgeon performs the intraoperative (surgical) component but does not furnish the preoperative and/or…- Use modifier -54 when the reporting surgeon provided only the intraoperative (surgical) component of a procedure and preoperative and/or postoperative management has been or will be provided by…
    55Modifier –55 indicates the billing provider furnished only postoperative management for a procedure that has a global surgical period. According to AAPC, this modifier is appended to the same CPT…- Use modifier -55 when billing the same CPT surgical code that has a 10- or 90-day global period and you, as a provider other than the original surgeon, furnished ONLY postoperative management (no…
    56Modifier ‑56 indicates the reporting provider furnished only the preoperative management for a surgical procedure and did not perform the intraoperative or postoperative care. It is used in…- Use Modifier -56 when a provider performs only the preoperative management in a split‑care situation (one physician manages preop care while a different physician performs the intraoperative…
    57CPT® modifier -57 (“Decision for Surgery”) is appended to an Evaluation and Management (E/M) service when that encounter results in the initial decision to perform a major surgery (a procedure with a…- Use modifier 57 when an E/M service provided by the same provider (or same tax ID) on the day of or the day before a major surgical procedure (90‑day global period) results in the initial decision…
    59Modifier 59 indicates a distinct procedural service when two procedures that are not normally billed together are clinically and procedurally separate. The CPT definition (as reiterated by CMS)…- Use modifier -59 to report a distinct procedural service when documentation supports that the procedure reported is not normally billed together with another service on the same day because of a…
    66Modifier 66 (Surgical Team) is used when three or more surgeons act as primary surgeons on a single, highly complex procedure. The AMA defines it for use when a surgical team — often composed of…- Use modifier 66 when three or more surgeons act as primary surgeons working collaboratively as a surgical team on a single, highly complex or difficult procedure (for example organ…

    Showing 1–10 of 14

    Related Provider Taxonomies

    8 rows

    Taxonomy Code
    207P00000X
    207L00000X
    207Q00000X
    363LP0200X
    207WX0200X
    2471C3401X
    364SH0200X
    246YC3302X

    Related ICD-10-CM Codes

    21 rows

    ICD-10-CM CodeDescription
    A48.1Legionnaires' disease
    K57.20Diverticulitis of large intestine with perforation and abscess without bleeding
    K57.30Diverticulosis of large intestine without perforation or abscess without bleeding
    K57.32Diverticulitis of large intestine without perforation or abscess without bleeding
    K57.33Diverticulitis of large intestine without perforation or abscess with bleeding
    K57.50Diverticulosis of both small and large intestine without perforation or abscess without bleeding
    K58.0Irritable bowel syndrome with diarrhea
    K58.9Irritable bowel syndrome, unspecified
    K61.0Anal abscess
    K61.1Rectal abscess

    Showing 1–10 of 21

    Related Payer Policy Updates

    Specialty: General Surgery1 / 3

    10 rows

    PolicyPayerEffective Date
    Surgical ProceduresUnitedHealthcare2026-09-01
    Outpatient Surgical Procedures - Site of ServiceUnitedHealthcare2026-09-01
    Site of Service Ambulatory Service Center (ASC) Select — Surgical or Diagnostic Procedures in AdultsPremera Bluecross2026-09-01
    Site of Service Ambulatory Surgical Center (ASC) Select — Surgical or Diagnostic Procedures in AdultsPremera Bluecross2026-09-01
    Site of Service Ambulatory Service Center (ASC) SelectPremera Bluecross2026-09-01
    Site of Service Ambulatory Surgical Center (ASC) Select — Site of Service for Ambulatory Surgical Procedures (ASC Select)Premera Bluecross2026-09-01
    Site of Service Ambulatory Service Center (ASC) SelectPremera Bluecross2026-09-01
    Outpatient Surgical Procedures - Site of Servicesierra health and life2026-08-01
    Medical Necessity Guidelines — Inpatient Surgical CareMass General Brigham Health Plan2026-08-01
    Ambulatory Surgery Center (ASC) - Site of Care PolicyKaiser Permanente2026-08-01

    Related Codes

    CPT-46020-ANAL-SETON-PLACEMENT

    CPT 46020: Placement of Anal Seton

    CPT-46030-ANAL-SETON-REMOVAL-ANAL-FISTULA

    CPT 46030: Removal of Anal Seton or Marker

    CPT-46045-RECTAL-PERIRECTAL-ABSCESS-DRAINAGE-TRANSANAL

    CPT 46045: Transanal Incision and Drainage of Rectal/Perirectal Abscess

    CPT-46050-PERIANAL-SUPERFICIAL-ABSCESS-INCISION-DRAINAGE

    CPT 46050: Incision and Drainage of Superficial Perianal Abscess

    CPT-46060-PERIRECTAL-ABSCESS-INCISION-DRAINAGE-FISTULA-MANAGEMENT

    CPT 46060: Incision and Drainage of Abscess with Fistula Treatment

    CPT-46070-ANAL-MEMBRANE-INCISION-INFANT

    CPT 46070: Incision of Congenital Anal Membrane in Infant

    CPT-46080-ANAL-SPHINCTEROTOMY-RELEASE-OF-ANAL-CONTRACTURE

    CPT 46080: Anal Sphincterotomy to Release Anal Contracture

    CPT-46083-EXTERNAL-HEMORRHOID-THROMBECTOMY-INCISION-DRAINAGE

    CPT 46083: Incision and Thrombectomy of External Hemorrhoid

    Frequently Asked Questions

    References

    1. 1.CPT® Codes and Descriptions. AAPC. Retrieved Aug 11, 2026.Maintains the CPT code set's official descriptions and guidelines, licensed from the American Medical Association, used as the definitional source for CPT codes on this page.
    2. 2.HCPCS Quarterly Update. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's quarterly release of HCPCS Level II codes and short/long descriptors, the source for HCPCS code definitions and update history.
    3. 3.ICD-10-CM Full Code List. Centers for Medicare & Medicaid Services (CMS). Retrieved Aug 11, 2026.CMS's complete ICD-10-CM diagnosis code list, used to cross-reference diagnosis codes associated with this procedure or service.
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